MRIQC: individual bold report

Summary

  • BIDS filename: sub-6033_ses-1_task-rest_bold.
  • Date and time: 2023-08-10, 19:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005765
aqi0.03880322690909092
dummy_trs0
dvarsnstd59.001402263985426
dvarsstd1.1109977180709716
dvarsvstd1.001498050618744
efc0.6045366343096353
fber2218.615966796875
fdmean0.11554294169106448
fdnum79
fdperc7.181818181818182
fwhmavg2.2733666666666665
fwhmx2.12811
fwhmy2.474555
fwhmz2.217435
gcor0.00528121
gsrx-0.013146516866981983
gsry0.07346446067094803
sizet1100
sizex104
sizey96
sizez64
snr6.7104308612624495
spacingtr0.5550000071525574
spacingx2.0
spacingy2.0
spacingz2.0
summarybgk22.612359247189236
summarybgmad8.023573767194595
summarybgmean24.96363639831543
summarybgmedian7.909090995788574
summarybgn364535.0
summarybgp052.094545364379883
summarybgp9595.85300216674804
summarybgstdv39.424278259277344
summaryfgk1.3505435727065693
summaryfgmad53.1472264938988
summaryfgmean388.3390197753906
summaryfgmedian384.2190856933594
summaryfgn183521.0
summaryfgp05308.3427429199219
summaryfgp95488.4918212890625
summaryfgstdv57.2568359375
tsnr26.124287778511643
AcquisitionDuration618.467
AcquisitionMatrixPE96
AcquisitionNumber1
AcquisitionTime14:30:30.390000
BandwidthPerPixelPhaseEncode17.361
BaseResolution104
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
CoilStringHeadNeck_64
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DerivedVendorReportedEchoSpacing0.000600004
DeviceSerialNumber67034
DwellTime2.1e-06
EchoTime0.022
EchoTrainLength72
EffectiveEchoSpacing0.000600004
FlipAngle47
ImageCommentsProject:earlypsychosis, Unaliased MB8/PE3
ImageOrientationPatientDICOM[0.999998, -0.000251707, 0.0020718, 3.85762e-08, 0.992703, 0.120587]
ImageType['ORIGINAL', 'PRIMARY', 'FMRI', 'NONE']
ImageTypeText['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM']
ImagingFrequency123.262
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
MRAcquisitionType2D
MTStateTrue
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameMAGNETOM Prisma Fit
MatrixCoilModeSENSE
ModalityMR
MultibandAccelerationFactor8
NonlinearGradientCorrectionTrue
PartialFourier0.75
PartialFourierDirectionPHASE
PatientPositionHFS
PercentPhaseFOV92.3077
PercentSampling100
PhaseEncodingDirectionj
PhaseResolution1
PixelBandwidth2289
ProtocolNameMb8_rest_HCP_22_64_555_2mmiso
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
PulseSequenceNameepfid2d1_96
ReceiveCoilActiveElementsHC1-7
ReceiveCoilNameHeadNeck_64
ReconMatrixPE96
RepetitionTime0.555
ScanOptionsPFP\FS
ScanningSequenceEP
SequenceVariantSK\SS
SeriesDescriptionMb8_rest_HCP_22_64_555_2mmiso
SeriesNumber5
ShimSetting[2632, 5342, -7352, 619, -94, -688, -10, -239]
SliceThickness2
SliceTiming[0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47]
SoftwareVersionssyngo MR XA30
SpacingBetweenSlices2
StationNameMRC35427
TaskNameRest
TotalReadoutTime0.0570004
TxRefAmp267.393
WipMemBlock7b0d1c9f-b723-40f8-8bf4-1f9ee3b20eed||Sequence: R017 nxva30a/master r/e4e260217; Mar 27 2023 19:45:08 by eja
md5sum3363e37806ee861d876bf8d8063c9aea
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.